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  1. Microsamples are simple blood sampling procedures utilizing small blood draws. Although microsamples are regularly used in some disciplines, proteomic analysis of these samples is an emerging field. Currently,...

    Authors: Amanda J. Campbell, Nicolai B. Palstrøm, Lars M. Rasmussen, Jes S. Lindholt and Hans C. Beck
    Citation: Clinical Proteomics 2025 22:20
  2. In recent years, the prevalence of non-alcoholic fatty liver disease (NAFLD) has risen among patients with chronic hepatitis B (CHB), coinciding with the increasing rates of obesity and metabolic syndrome. Bot...

    Authors: Xin Tong, Yawen Wan, Shengxia Yin, Li Shao, Renling Yao, Xiaoyan Ma, Fajuan Rui, Junping Shi, Chao Wu and Jie Li
    Citation: Clinical Proteomics 2025 22:19
  3. Hypertensive nephrosclerosis (HN) is a major cause of end-stage renal disease; however, few longitudinal studies have employed serum proteomics to document its progression. This study aimed to identify potenti...

    Authors: Ole Petter Nordbø, Øystein Eikrem, Philip A. Kalra, Hans-Peter Marti and Jessica Furriol
    Citation: Clinical Proteomics 2025 22:17
  4. Assembly modulators are a new class of allosteric site-targeted therapeutic small molecules, some of which are effective at restoring nuclear localization of TDP-43 in ALS cellular models, and which display ef...

    Authors: Shao Feng Yu, Maya Michon, Anuradha F. Lingappa, Kumar Paulvannan, Dennis Solas, Kim Staats, Justin Ichida, Debendranath Dey, Jeffrey Rosenfeld and Vishwanath R. Lingappa
    Citation: Clinical Proteomics 2025 22:16
  5. Endometrial cancer (EC), a prevalent and intricate disease, is associated with a poor prognosis among gynecological malignancies. Its incidence rising globally underscores the urgent need for biomarkers detect...

    Authors: Yuhao An, Quanxin Feng, Li Jia, Xinrui Sha, Tuanjie Zhang, Linlin Lu, Rui Wang and Bin Bai
    Citation: Clinical Proteomics 2025 22:15
  6. Prostate cancer is one of the most frequently diagnosed cancers in men. Prostate tumor staging and disease aggressiveness are evaluated based on the Gleason scoring system, which is further used to direct clin...

    Authors: Allison L. Hunt, Waleed Barakat, Sasha C. Makohon-Moore, Brian L. Hood, Kelly A. Conrads, Katlin N. Wilson, Tamara Abulez, Jonathan Ogata, Kenneth J. Pienta, Tamara L. Lotan, Haresh Mani, Donald L. Trump, Nicholas W. Bateman and Thomas P. Conrads
    Citation: Clinical Proteomics 2025 22:14
  7. Plasma-based high-plex proteomic profiling were performed in prostate cancer (PC) patients using the Olink® Explore Proximity Extension Assay to identify plasma proteins associated in different PC states and t...

    Authors: Hyejung Lee, Jincheng Shen, Muhammad Zaki Fadlullah, Anna Neibling, Claire Hanson, Enos Ampaw, Tengda Lin, Matt Larsen, Jennifer Lloyd, Benjamin L. Maughan, Umang Swami, Sumati Gupta, Jonathan Tward, Skyler B. Johnson, Brock O’Neil, Bogdana Schmidt…
    Citation: Clinical Proteomics 2025 22:13
  8. Pulmonary nodule with diameters ranging 8–30 mm has a high occurrence rate, and distinguishing benign from malignant nodules can greatly improve the patient outcome of lung cancer. However, sensitive and speci...

    Authors: Bin Jia, Tingting Wang, Liangxuan Pan, Xiaoyao Du, Jing Yang, Fei Gao, Lujian Liao, Bianqin Guo and Junqiang Dong
    Citation: Clinical Proteomics 2025 22:11
  9. The Human Proteome Project has credibly detected nearly 93% of the roughly 20,000 proteins which are predicted by the human genome. However, the proteome is enigmatic, where alterations in amino acid sequences...

    Authors: Kevin J. Zemaitis, James M. Fulcher, Rashmi Kumar, David J. Degnan, Logan A. Lewis, Yen-Chen Liao, Marija Veličković, Sarah M. Williams, Ronald J. Moore, Lisa M. Bramer, Dušan Veličković, Ying Zhu, Mowei Zhou and Ljiljana Paša-Tolić
    Citation: Clinical Proteomics 2025 22:9
  10. To investigate the association between admission glucose and HbA1c values and inflammatory plasma proteins in hospitalized patients with acute ST-elevation myocardial infarction (STEMI).

    Authors: Meisinger Christa, Freuer Dennis, Raake Philip, Linseisen Jakob and Schmitz Timo
    Citation: Clinical Proteomics 2025 22:8
  11. Glioblastoma multiforme (GBM) is the most common malignant primary brain tumor. Notwithstanding tremendous efforts having been put in multi-omics research to profile the dysregulated molecular mechanisms and c...

    Authors: Mingjun Hu, Kaiyue Xu, Ge Yang, Bo Yan, Qianqian Yang, Liang Wang, Shisheng Sun and Huijuan Wang
    Citation: Clinical Proteomics 2025 22:6
  12. Formalin-fixed paraffin-embedded (FFPE) tissues present an important resource for cancer proteomics. They are more readily available than fresh frozen (FF) tissues and can be stored at ambient temperature for ...

    Authors: Jennifer M. S. Koh, Erin K. Sykes, Jyoti Rukhaya, Asim Anees, Qing Zhong, Christopher Jackson, Benedict J. Panizza, Roger R. Reddel, Rosemary L. Balleine, Peter G. Hains and Phillip J. Robinson
    Citation: Clinical Proteomics 2025 22:5
  13. Integrating functional proteomics and next-generation sequencing (NGS) offers a comprehensive approach to unraveling the molecular intricacies of breast cancer. This study investigates the functional interplay...

    Authors: Wei-Chi Ku, Chih-Yi Liu, Chi-Jung Huang, Chen-Chung Liao, Yen-Chun Huang, Po-Hsin Kong, Hsieh Chen-Chan, Ling-Ming Tseng and Chi-Cheng Huang
    Citation: Clinical Proteomics 2025 22:4
  14. The standard “7 + 3” induction results in 30% of de novo acute myeloid leukemia (AML) patients not achieving complete remission (CR). We aimed to utilize the Olink® platform to compare the bone marrow plasma prot...

    Authors: Ting-Shuan Wu, Tzu-Hung Hsiao, Chung-Hsing Chen, Hsin-Ni Li, Miao-Neng Hung, Pei-Pei Jhan, Jia-Rung Tsai and Chieh-Lin Jerry Teng
    Citation: Clinical Proteomics 2025 22:3
  15. Medwakh smoking has radically expanded among youth in the Middle East and around the world. The rising popularity of medwakh/dokha usage is linked to the onset of several chronic illnesses including cardiovasc...

    Authors: K. G. Aghila Rani, Nelson C. Soares, Betul Rahman, Alexander D. Giddey, Hamza M. Al-Hroub, Mohammad H. Semreen and Sausan Al Kawas
    Citation: Clinical Proteomics 2025 22:2
  16. Our objective is to determine the protein and complements constituents of Cord blood Platelet-rich plasma (CB-PRP), based on the hypothesis that it contains beneficial components capable of arresting or potent...

    Authors: Maria Cristina Savastano, Federico Giannuzzi, Alfonso Savastano, Valentina Cestrone, Francesco Boselli, Matteo Mario Carlà, Nicola Claudio D’Onofrio, Ilaria Biagini, Clara Rizzo, Maria Bianchi, Caterina Giovanna Valentini, Luciana Teofili, Andrea Urbani, Federica Iavarone and Stanislao Rizzo
    Citation: Clinical Proteomics 2025 22:1
  17. The therapeutic potential of mesenchymal stem cells (MSCs) may be partly attributed to their secretion growth factors, cytokines and chemokines. In various preclinical studies, the use of MSC-conditioned media...

    Authors: Xueyan Guo, Junyan Wang, Rong Su, Dan Luo, Keli Zhao and Yan Li
    Citation: Clinical Proteomics 2024 21:69
  18. Pancreatic cancer is a highly aggressive tumor with a poor prognosis due to a low early detection rate and a lack of biomarkers. Most of pancreatic cancer is pancreatic ductal adenocarcinoma (PDAC). Alteration...

    Authors: Yi Jin, Ran Hu, Yufan Gu, Ailin Wei, Ang Li and Yong Zhang
    Citation: Clinical Proteomics 2024 21:68
  19. Radiation-induced lung injury (RILI) is a common adverse effect of radiation therapy that negatively affects treatment progression and the quality of life of patients. Identifying biomarkers for RILI can provi...

    Authors: Jing Liu, Kuanke Gao, Xue Ren, Tong Wu, Haibo Zhang, Defu Yang, Hengjiao Wang, Ying Xu and Ying Yan
    Citation: Clinical Proteomics 2024 21:67
  20. Tuberculosis (TB) diagnostic monitoring is paramount to clinical decision-making and the host biomarkers appears to play a significant role. The currently available diagnostic technology for TB detection is in...

    Authors: Jiajia Yu, Jinfeng Yuan, Zhidong Liu, Huan Ye, Minggui Lin, Liping Ma, Rongmei Liu, Weimin Ding, Li Li, Tianyu Ma, Shenjie Tang and Yu Pang
    Citation: Clinical Proteomics 2024 21:66
  21. The effect of varying brain ventricular volume on the cerebrospinal fluid (CSF) proteome has been discussed as possible confounding factors in comparative protein level analyses. However, the relationship betw...

    Authors: Sofia Bergström, Sára Mravinacová, Olof Lindberg, Anna Zettergren, Eric Westman, Lars-Olof Wahlund, Kaj Blennow, Henrik Zetterberg, Silke Kern, Ingmar Skoog and Anna Månberg
    Citation: Clinical Proteomics 2024 21:65
  22. Alternative N-glycosylation of serum proteins has been observed in colorectal cancer (CRC), esophageal squamous cell carcinoma (ESCC) and gastric cancer (GC), while comparative study among those three cancers ...

    Authors: Si Liu, Jianmin Huang, Yuanyuan Liu, Jiajing Lin, Haobo Zhang, Liming Cheng, Weimin Ye and Xin Liu
    Citation: Clinical Proteomics 2024 21:64
  23. The vitreous humor serves as a window into the physiological and pathological processes of the eye, particularly the retina. Diabetic retinopathy (DR), a leading cause of blindness, involves hyperglycemia-indu...

    Authors: Tommaso Brighenti, Giuseppe Neri, Marco Mazzola, Gabriele Tomé, Mariella Scalfati, Daniele Peroni, Romina Belli, Elena Zampedri, Toma Tebaldi, Ugo Borello, Federica Romanelli and Simona Casarosa
    Citation: Clinical Proteomics 2024 21:63
  24. Mucosal healing is the therapeutic target for ulcerative colitis (UC). While amino acids (AAs) and the gut microbiota are known to be involved in the pathogenesis of UC, their specific roles in mucosal healing...

    Authors: Jing Wu, Maojuan Li, Chan Zhou, Jiamei Rong, Fengrui Zhang, Yunling Wen, Jinghong Qu, Rui Wu, Yinglei Miao and Junkun Niu
    Citation: Clinical Proteomics 2024 21:62
  25. COVID19 is a pandemic that has affected millions around the world since March 2020. While many patients recovered completely with mild illness, many patients succumbed to various organ morbidities. This hetero...

    Authors: Madhan Vishal Rajan, Vipra Sharma, Neelam Upadhyay, Ananya Murali, Sabyasachi Bandyopadhyay and Gururao Hariprasad
    Citation: Clinical Proteomics 2024 21:61
  26. Spatial proteomics seeks to understand the spatial organization of proteins in tissues or at different subcellular localization in their native environment. However, capturing the spatial organization of prote...

    Authors: Yuanwei Xu, T. Mamie Lih, Angelo M. De Marzo, Qing Kay Li and Hui Zhang
    Citation: Clinical Proteomics 2024 21:60
  27. The gut-brain axis has garnered increasing attention, with observational studies suggesting its involvement in the disease activity and progression of inflammatory bowel disease (IBD), but the precise mechanis...

    Authors: Yifeng Xu, Zhaoqi Yan and Liangji Liu
    Citation: Clinical Proteomics 2024 21:59
  28. Cardiovascular diseases (CVDs) are the leading cause of death worldwide, and the prevalence of CVDs increases markedly with age. Due to the high energetic demand, the heart is highly sensitive to mitochondrial...

    Authors: Andrea Ramirez-Sagredo, Anju Teresa Sunny, Kellye A. Cupp-Sutton, Trishika Chowdhury, Zhitao Zhao, Si Wu and Ying Ann Chiao
    Citation: Clinical Proteomics 2024 21:57
  29. Progressive supranuclear palsy (PSP) is a neurodegenerative disorder often misdiagnosed as Parkinson’s Disease (PD) due to shared symptoms. PSP is characterized by the accumulation of tau protein in specific b...

    Authors: Yura Jang, Sungtaek Oh, Anna J. Hall, Zhen Zhang, Thomas F. Tropea, Alice Chen-Plotkin, Liana S. Rosenthal, Ted M. Dawson, Chan Hyun Na and Alexander Y. Pantelyat
    Citation: Clinical Proteomics 2024 21:56
  30. Research biopsies have great potential to advance scientific knowledge by helping to establish predictors of favourable or unfavourable outcomes in kidney transplantation. We evaluated punch and core biopsies ...

    Authors: Sadr ul Shaheed, Hannah McGivern, Marta Oliveira, Corinna Snashall, Chris W. Sutton, Ka Ho Tam, Simon Knight, Syed Hussain Abbas, Jesper Kers, Sarah Cross, Rutger Ploeg and James Hunter
    Citation: Clinical Proteomics 2024 21:55
  31. Proteomics and metabolomics offer substantial potential for advancing kidney transplant research by providing versatile opportunities for gaining insights into the biomolecular processes occurring in donors, r...

    Authors: Lente J. S. Lerink, Christopher W. Sutton, Henny G. Otten, Letizia Lo Faro, Rutger J. Ploeg, Jan H. N. Lindeman and Sadr Shaheed
    Citation: Clinical Proteomics 2024 21:54
  32. Mycosis fungoides (MF) is the most common type of cutaneous T cell lymphoma. As the early clinical manifestations of MF are non-specific (e.g., erythema or plaques), it is often misdiagnosed as inflammatory sk...

    Authors: Hongbin Song, Zhonghui Hu, Shiyu Zhang, Lu Yang, Jindi Feng, Lu Lu, Yuehua Liu and Tao Wang
    Citation: Clinical Proteomics 2024 21:53
  33. Tumor recurrence and metastatic progression remains the leading cause for breast cancer related mortalities. However, the proteomes of patient- matched primary breast cancer (BC) and metastatic lesions have no...

    Authors: Jaspreet Kaur, Sung Yun Jung, Marie Austdal, Aaditya Krishna Arun, Thomas Helland, Gunnar Mellgren, Tone Hoel Lende, Emiel A. M. Janssen, Håvard Søiland and Ritu Aneja
    Citation: Clinical Proteomics 2024 21:52
  34. The molecular mechanisms underlying development of posthemorrhagic hydrocephalus (PHH) following subarachnoid hemorrhage (SAH) remain incompletely understood. Consequently, treatment strategies tailored toward...

    Authors: Sara Diana Lolansen, Nina Rostgaard, Markus Harboe Olsen, Maud Eline Ottenheijm, Lylia Drici, Tenna Capion, Nicolas Hernandez Nørager, Nanna MacAulay and Marianne Juhler
    Citation: Clinical Proteomics 2024 21:51
  35. Estrogen receptor-positive (ER+) breast cancer accounts for two-thirds of all breast cancers, and its early and late recurrences still threaten patients’ long-term survival and quality of life. Finding candida...

    Authors: Qing Yu, Chunhua Qu, Jinliang Liang, Peiqi Chen, Kaiying Zhang, Yanji Zhang, Yuening Zhang, Zherui Li, Shaojun Liu, Zhaoshou Yang, Hongyan Sun and Anli Yang
    Citation: Clinical Proteomics 2024 21:50
  36. Understanding the interplay of the proteome and the metabolome helps to understand cellular regulation and response. To enable robust inferences from such multi-omics analyses, we introduced and evaluated a wo...

    Authors: Hagen M. Gegner, Thomas Naake, Karim Aljakouch, Aurelien Dugourd, Georg Kliewer, Torsten Müller, Dustin Schilling, Marc A. Schneider, Nina Kunze-Rohrbach, Thomas G.P. Grünewald, Rüdiger Hell, Julio Saez-Rodriguez, Wolfgang Huber, Gernot Poschet and Jeroen Krijgsveld
    Citation: Clinical Proteomics 2024 21:49
  37. Characterization of the host response in cutaneous leishmaniasis (CL) through proteome profiling has gained limited insights into leishmaniasis research compared to that of the parasite. The primary objective ...

    Authors: Nuwani H. Manamperi, Nimesha Madhushani Edirisinghe, Harshima Wijesinghe, Lakmali Pathiraja, Nishantha Pathirana, Vishmi Samudika Wanasinghe, Chamalka Gimhani De Silva, W. Abeyewickreme and Nadira D. Karunaweera
    Citation: Clinical Proteomics 2024 21:48
  38. Amyloidosis is a disease characterized by local and systemic extracellular deposition of amyloid protein fibrils where its excessive accumulation in tissues and resistance to degradation can lead to organ fail...

    Authors: Jennifer T. Aguilan, Jihyeon Lim, Sabrina Racine-Brzostek, Joshua Fischer, Cristina Silvescu, Shannon Cornett, Edward Nieves, Damodara Rao Mendu, Carlos-Madrid Aliste, Stacia Semple, Ruth Angeletti, Louis M. Weiss, Adam Cole, Michael Prystowsky, James Pullman and Simone Sidoli
    Citation: Clinical Proteomics 2024 21:47
  39. The development of breast cancer has been mainly reported in women who have reached the post-menopausal stage; therefore, it is the primary factor responsible for death amongst postmenopausal women. However, i...

    Authors: Abhishek Pant, Ashish. P. Anjankar, Sandesh Shende, Archana Dhok, Roshan Kumar Jha and Anjali Vagga Manglaram
    Citation: Clinical Proteomics 2024 21:45
  40. Tumorigenesis and progression of prostate cancer (PCa) are indispensably dependent on androgen receptor (AR). Antiandrogen treatment is the principal preference for patients with advanced PCa. However, the mol...

    Authors: Yurun Huang, Guanglin Yang, Xinpeng Yao, Yue Fang, Qiliang Lin, Menghan Zhou, Yiping Yang, Qinggui Meng, Qingyun Zhang and Shan Wang
    Citation: Clinical Proteomics 2024 21:44
  41. Multiple sclerosis (MS) is a clinically and biologically heterogenous disease with currently unpredictable progression and relapse. After the development and success of neurofilament as a cerebrospinal fluid (...

    Authors: Lincoln I. Wurtz, Evdokiya Knyazhanskaya, Dorsa Sohaei, Ioannis Prassas, Sean Pittock, Maria Alice V. Willrich, Ruba Saadeh, Ruchi Gupta, Hunter J. Atkinson, Diane Grill, Martin Stengelin, Simon Thebault, Mark S. Freedman, Eleftherios P. Diamandis and Isobel A. Scarisbrick
    Citation: Clinical Proteomics 2024 21:42
  42. Gliomas are aggressive malignant tumors, with poor prognosis. There is an unmet need for the discovery of new, non-invasive biomarkers for differential diagnosis, prognosis, and management of brain tumors. Our...

    Authors: Atefeh Ghorbani, Miyo K. Chatanaka, Lisa M. Avery, Mingyue Wang, Jermaine Brown, Rachel Cohen, Taron Gorham, Salvia Misaghian, Nikhil Padmanabhan, Daniel Romero, Martin Stengelin, Anu Mathew, George Sigal, Jacob Wohlstadter, Craig Horbinski, Katy McCortney…
    Citation: Clinical Proteomics 2024 21:41

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